Fully-automated Multi-spectral Pulmonary Registration for Hyperpolarized Noble Gas MRI Using Neural Networks
Alexander M Matheson1, Rachel L Eddy1, Jonathan L MacNeil2, Marrissa J McIntosh1, and Grace M Parraga1,2
1Medical Biophysics, Robarts Research Institute, Western University, London, ON, Canada, 2School of Biomedical Engineering, Robarts Research Institute, Western University, London, ON, Canada
Co-registered hyperpolarized gas and proton MRI are used to calculate lung function biomarkers but registration is challenging due to different contrast and imaging features. Neural networks generated multi-spectral registration transforms with an average error of less than one pixel.
Five representative
examples of CNN correction performance. Images show cyan 3He
images overlaying 1H images. Top
row: images with random affine transformations applied. Middle row: proposed
registration generated by multi-input UNet. Bottom row: original co-registered
images obtained through semi-automated, landmark based registration.
Participant
demographics, pulmonary function tests and imaging measurements. Values
reported as mean (standard deviation). BMI = body mass index, PFT = pulmonary
function tests, FEV1 = forced expiratory volume in 1 second, FVC =
functional vital capacity, RV = residual volume, TLV = total lung volume, VDP =
ventilation defect percent